get_pathway_info: Dataframe containing meta-information of pathways in database
In kpj/dce: Pathway Enrichment Based on Differential Causal Effects
View source: R/pathway_databases.R
get_pathway_info R Documentation
Dataframe containing meta-information of pathways in database
Description
Dataframe containing meta-information of pathways in database
Usage
get_pathway_info(
query_species = "hsapiens",
database_list = NULL,
include_network_statistics = FALSE
)
Arguments
query_species
For which species
database_list
Which databases to query. Query all if 'NULL'.
include_network_statistics
Compute some useful statistics
per pathway. Takes longer!
Value
data frame with pathway meta information
Examples
head(get_pathway_info(database_list = c("kegg")))
kpj/dce documentation built on Oct. 29, 2022, 1:40 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
View source: R/pathway_databases.R
| get_pathway_info | R Documentation |
Dataframe containing meta-information of pathways in database
Description
Dataframe containing meta-information of pathways in database
Usage
get_pathway_info( query_species = "hsapiens", database_list = NULL, include_network_statistics = FALSE )
Arguments
query_species |
For which species |
database_list |
Which databases to query. Query all if 'NULL'. |
include_network_statistics |
Compute some useful statistics per pathway. Takes longer! |
Value
data frame with pathway meta information
Examples
head(get_pathway_info(database_list = c("kegg")))
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.