Man pages for krumsiek/MoDentify
Phenotype-driven module identification

aggregated.meanAggregated Mean Scores
calculate.module.representativesCalculate Module Representative
calculate.module.scoreCalculate Module-score
create.networkNetwork inference with Gaussian graphical models (GGMs)
create.pathways.networkSubnetwork Creation function
delete.duplicatesDelete Duplicates from Modules
delete.supergraphsDelete Supergraphs from Modules
draw.moduleDraw Single Module
draw.modulesDraw Modules
draw.network.with.modulesDraw Network with Modules
eigen.metabolitesCalculate eigenmetabolites as module representatives
export.modulesExport Modules
get.merged.modulesGet Module scores for Merged Modules
get.neighbors.for.moduleGet Neighbors for Module
get.qmdiab.dataCalculate eigenmetabolites as module representatives
getToMergeGet Overlaping Modules
gg.edges.between.attributesPlotting of the edges between attribute types
gg.explained.variancePlotting of the explained variances
greedy.module.selectionGreedy Module Selection for a Seed
identify.modulesModule Identification
MoDentify-packagePhenotype-driven module identification
order.annotationOrder Annotations
volcano.plotVolcano Plot
krumsiek/MoDentify documentation built on July 24, 2018, 3:42 a.m.