Files in ksauby/GTMNERRproc
Data processing functions for GTMNERR data.
.Rapp.history
.Rbuildignore
.gitignore
Complete_Surveys_function.R
DESCRIPTION
Data/SequenceofDates.rda
Fruit_stricta_ZIP_sigparms_and_parmest_size_wo_clones.pdf
GTMNERRproc.Rproj
NAMESPACE
R/.Rapp.history
R/Format_PlantIDs_Function.R
R/InsectFunctions.R
R/SequenceofDates.R
R/WoodyTrunk_Function.R
R/addSamplingPeriods.R
R/analyzeBootstrappedMatrixPopModels.R
R/analyzeMatrixPopModels.R
R/calculateClonalReproduction.R
R/calculateFruitPresence.R
R/calculateNumberIndividualsperStage.R
R/calculatePlantVolume.R
R/calculateStageDistribution.R
R/calculateTransitionRates.R
R/changeVariableNames.R
R/checkPlantSurveys.R
R/classifybyStage.R
R/createClonalReproTransitionMatrix.R
R/createDeadFactorVariable.R
R/createHabitatType.R
R/createInsectCategoricalVariable.R
R/createInsectFactorVariables.R
R/createPlantInfobyPlant.R
R/createPlantInsectPresence.R
R/createPlantSurveysbyYear.R
R/createPlotSurveysfromOrigPlantSurveys.R
R/createPlotSurveysfromPlantSurveys.R
R/createProjectionMatrix.R
R/createSequenceofDates.R
R/destring.R
R/determineCompleteSurveys.R
R/determineInsectPresenceDuringStudy.R
R/estimateCactusDensityperPlot.R
R/findFirstDeadMissingObservation.R
R/fixDeadRecords.R
R/fixInconsistentDeadMissingRecords.R
R/mergeDuplicateSurveys.R
R/mergePlantRecordsfromMultiplePlots.R
R/mergePlantSurveysPlotSurveys.R
R/mergePlotSurveysDemoPlotSurveys.R
R/plotElasticitySensitivity.R
R/plotSeedBankSeedSurvival.R
R/prepDataTransitionMatrix.R
R/printPopulationMatrices.R
R/processOccupancyPlotInfo.R
R/processOccupancyPlotSurveys.R
R/processOriginalPlantData.R
R/processPlantInfo.R
R/processPlantSurveys.R
R/processPlantSurveysbyYear.R
R/processPopulationModelResults.R
R/processSurveysMergedbyPlant.R
R/renamePatches.R
R/renameSpecies.R
R/runPopulationModels.R
R/runPopulationModels_bootstrap.R
man/Format_PlantIDs_Function.Rd
man/SequenceofDates.Rd
man/WoodyTrunk_Function.Rd
man/addSamplingPeriods.Rd
man/analyzeBootstrappedMatrixPopModels.Rd
man/analyzeMatrixPopModels.Rd
man/calculateClonalReproduction.Rd
man/calculateFruitPresence.Rd
man/calculateNumberIndivperStage.Rd
man/calculatePlantVolume.Rd
man/calculateStageDistribution.Rd
man/calculateTransitionRates.Rd
man/changeVariableNames.Rd
man/checkPlantSurveys.Rd
man/classifybyStage.Rd
man/createClonalReproTransitionMatrix.Rd
man/createDeadFactorVariable.Rd
man/createHabitatType.Rd
man/createInsectFactorVariables.Rd
man/createMothOccupancyVariable.Rd
man/createMothOccupancytVariable.Rd
man/createNewInsectVariables.Rd
man/createPlantInfobyPlant.Rd
man/createPlantInsectPresence.Rd
man/createPlantSurveysbyYear.Rd
man/createPlotSurveysfromOrigPlantSurveys.Rd
man/createPlotSurveysfromPlantSurveys.Rd
man/createProjectionMatrix.Rd
man/createSequenceofDates.Rd
man/destring.Rd
man/determineCompleteSurveys.Rd
man/determineInsectPresenceDuringStudy.Rd
man/estimateCactusDensityperPlot.Rd
man/findFirstDeadMissingObservation.Rd
man/firstup.Rd
man/fixDeadRecords.Rd
man/fixInconsistentDeadMissingRecords.Rd
man/mergeDuplicateSurveys.Rd
man/mergePlantRecordsfromMultiplePlots.Rd
man/mergePlantSurveysPlotSurveys.Rd
man/mergePlotSurveysDemoPlotSurveys.Rd
man/plotElasticitySensitivity.Rd
man/plotLTREReproductiveValues.Rd
man/plotSeedBankSeedSurvival.Rd
man/prepDataTransitionMatrix.Rd
man/printLTREPopulationMatrices.Rd
man/printPopulationMatrices.Rd
man/processOccupancyPlotInfo.Rd
man/processOccupancyPlotSurveys.Rd
man/processOriginalPlantData.Rd
man/processPlantInfo.Rd
man/processPlantSurveys.Rd
man/processPlantSurveysbyYear.Rd
man/processPopulationModelingResults.Rd
man/processSurveysMergedbyPlant.Rd
man/renamePatches.Rd
man/renameSpecies.Rd
man/runBootstrapPopulationModels.Rd
man/runPopulationModels.Rd
tests/testthat.R
tests/testthat/test_population_modeling.R
