Man pages for ksauby/GTMNERRproc
Data processing functions for GTMNERR data.

addSamplingPeriodsAdd Sampling Period Variable
analyzeBootstrappedMatrixPopModelsAnalyze Bootstrapped Matrix Population Models
analyzeMatrixPopModelsAnalyze Matrix Population Models
calculateClonalReproductionCalculate Clonal Reproduction
calculateFruitPresenceDetermine Fruit and Flower Presence
calculateNumberIndivperStageCreate Vector of the Number of Individuals per Stage
calculatePlantVolumeCalculate Plant Volume
calculateStageDistributionCalculate Observed Stage Distribution
calculateTransitionRatesCreate Transition Rate Matrix
changeVariableNamesAbbreviate Variable Names
checkPlantSurveysCheck Plant Surveys for Errors
classifybyStageClassify plants by Stage
createClonalReproTransitionMatrixCreate Clonal Reproduction Transition Matrix
createDeadFactorVariableCreate Dead Variable (Factor Type)
createHabitatTypeProcess Create Habitat Type Variable
createInsectFactorVariablesMake Insect Factor Variables
createMothOccupancytVariableCreate Moth Occupancy Variable
createMothOccupancyVariableCreate Moth Occupancy During Study Variable
createNewInsectVariablesCalculate Insect Variables
createPlantInfobyPlantCreate Plant Info by Plant
createPlantInsectPresenceCreate Moth Evidence and Insect Evidence Variables
createPlantSurveysbyYearCreate Dataset by Year
createPlotSurveysfromOrigPlantSurveysCreate occupancy plot survey data from original plant survey...
createPlotSurveysfromPlantSurveysCreate occupancy plot survey data from plant surveys
createProjectionMatrixCreate Projection Matrix
createSequenceofDatesCreate sequence of dates, by fecundity year, to use as date...
destringConvert character vector to numeric, ignoring irrelevant...
determineCompleteSurveysDetermine whether a survey was complete
determineInsectPresenceDuringStudyDetermine if an insect species was ever detected during the...
estimateCactusDensityperPlotEstimate cactus density per plot
findFirstDeadMissingObservationFilter Plant Surveys by Plant and Keep Only the First...
firstupfrom...
fixDeadRecordsFix Dead Records for Transition Matrix Data
fixInconsistentDeadMissingRecordsFix Surveys for Plants with Inconsistent Records of...
Format_PlantIDs_FunctionFormat PlantID
mergeDuplicateSurveysMerge Duplicate Surveys
mergePlantRecordsfromMultiplePlotsMerge Plants from Multiple Plots
mergePlantSurveysPlotSurveysfill occupancy plot surveys with info from plant surveys
mergePlotSurveysDemoPlotSurveysfill demography plot surveys with info from plant surveys
plotElasticitySensitivityPlot Elasticity and Sensitivity Data
plotLTREReproductiveValuesPlot Reproductive Values for LTRE
plotSeedBankSeedSurvivalPlot Seed Bank Data
prepDataTransitionMatrixPrepare Data For Transition Matrix Function
printLTREPopulationMatricesSuccessively print LTRE population matrices for inclusion in...
printPopulationMatricesSuccessively print population matrices for inclusion in an...
processOccupancyPlotInfoProcess Plot Survey Data
processOccupancyPlotSurveysProcess Plot Survey Data
processOriginalPlantDataProcess Original Plant Survey Data
processPlantInfoProcess Plant Info
processPlantSurveysProcess GTMNERR Plant Survey Data
processPlantSurveysbyYearProcess Plant Surveys by Year data
processPopulationModelingResultsProcess Population Model Results
processSurveysMergedbyPlantProcess Plant Survey Data, per plant
renamePatchesRename Patches
renameSpeciesRename Species levels
runBootstrapPopulationModelsRun Boostrapped Population Models
runPopulationModelsRun Population Models
SequenceofDatesDatasets of sequence of dates, by fecundity year, to use as...
WoodyTrunk_FunctionStandardize "WoodyTrunk" values.
ksauby/GTMNERRproc documentation built on Nov. 22, 2017, 2:13 p.m.