FS_fExtractWinterFluxes: Subset winter fluxes.
In ksmiff33/FluxSynthU: Suite of functions to analyze eddy covariance data

View source: R/FS_fExtractWinterFluxes.R

Subset flux data for the GPP-free period only

FS_fExtractWinterFluxes(
  path_to_fluxdat,
  path_to_critdates,
  outpath,
  site.meta,
  export.files = TRUE,
  batch_process = FALSE,
  qc = c("auto", "none", "specified"),
  qc_col = NULL
)

`path_to_fluxdat`	character string, navigate to the directory containing the complete output datasets
`path_to_critdates`	character string, navigate to the directory containing critical date files (must have dates associated with end of current winter (ECW) and start of next winter (SNW))
`outpath`	character string, specify path to where you'd like to export the winter-only output files
`site.meta`	dataframe, site metadata file contained in FluxSynthU
`export.files`	logical, if TRUE (default) exports dataframes as text files in the outpath directory.
`batch_process`	logical, if TRUE, batch processes all sites within the inpath directory (defaults to FALSE).
`qc`	choices: 'auto', 'none' or 'specified', If the user selects 'auto', the data will be subset according to quality check flags that were automatically generated during Critical Date estimation. If 'specified' the user must provide a column name containing quality check flags (0 = bad, 1 = good). If 'none' the data is not subset.
`qc_col`	character, specify the name of a column containing qc flags (0 = bad, 1 = good). Defaults to NULL.