R/GSEPD is a bioinformatics package for R to help disambiguate transcriptome samples (a matrix of RNA-Seq counts at transcript IDs) by automating differential expression (with DESeq2), then gene set enrichment (with GOSeq), and finally a N-dimensional projection to quantify in which ways each sample is like either treatment group.
|Bioconductor views||DifferentialExpression GeneSetEnrichment ImmunoOncology RNASeq Software|
|Maintainer||Karl Stamm <[email protected]>|
|Package repository||View on GitHub|
Install the latest version of this package by entering the following in R:
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