kstammits/rgsepd: Gene Set Enrichment / Projection Displays
R/GSEPD is a bioinformatics package for R to help disambiguate transcriptome samples (a matrix of RNA-Seq counts at transcript IDs) by automating differential expression (with DESeq2), then gene set enrichment (with GOSeq), and finally a N-dimensional projection to quantify in which ways each sample is like either treatment group.
Getting started
Browse package contents
Package details |
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| Author | Karl Stamm |
| Bioconductor views | DifferentialExpression GeneSetEnrichment ImmunoOncology RNASeq Software |
| Maintainer | Karl Stamm <karl.stamm@gmail.com> |
| License | GPL-3 |
| Version | 1.29.2 |
| Package repository | View on GitHub |
| Installation |
Install the latest version of this package by entering the following in R:
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