Trajectory-class: The 'Trajectory' - Class

In kueckelj/SPATA2: A Toolbox for Spatial Expression Analysis

The Trajectory - Class

Description

S4 class that represents trajectories drawn within real or latent space.

Slots

comment

character. A comment about why the trajectory was drawn.

id

character. ID that uniquely identfies the trajectory in a sample.

projection

data.frame. Data.frame that contains the length of the projection of each barcode spot onto the trajectory.

sample

character. The sample name.

segment

data.frame. Contains the course of the trajetory in form of a data.frame with the variables x, y, xend and yend.

width

numeric. The width of the rectangle that was spanned along the trajectory. (Length of the rectangle corresponds to the length of the segment.)

kueckelj/SPATA2 documentation built on Feb. 27, 2025, 1:45 p.m.