plotBarchart | R Documentation |
Visualizes the count or the proportion of barcode spots falling
into certain groups via barcharts. It does so either for the whole sample or
in a comparing manner if across
is specified.
plotBarchart(
object,
grouping_variables,
across = NULL,
across_subset = NULL,
relevel = NULL,
clrp = NULL,
clrp_adjust = NULL,
position = NULL,
display_facets = NULL,
ncol = NULL,
nrow = NULL,
...
)
object |
An object of class |
across |
Character value or NULL. Specifies the grouping variable of interest. Use |
across_subset |
Character vector or NULL. Specifies the particular groups
of interest the grouping variable specified in argument If set to NULL all of them are chosen. You can prefix groups you are NOT interested in with a '-'. (Saves writing if there are more groups you are interested in than groups you are not interested in.) Use |
relevel |
Logical value. If set to TRUE the input order of |
clrp |
Character value. Specifies the color palette to be used to represent
groups of discrete variables. Run |
clrp_adjust |
Named character vector or NULL. If character, it adjusts the color palette that is used to represent the groups. Names of the input vector must refer to the group and the respective named element denotes the color with which to represent the group. |
display_facets |
Logical value. If set to TRUE the plot is split via
|
nrow , ncol |
Numeric values or NULL. Used to arrange multiple plots. |
... |
Additional arguments given to the respective |
variables |
Character vector. The discrete features whose group count or
proportion you want to display. Must not contain the feature specified in
|
Returns a ggplot-object that can be additionally customized according to the rules of the ggplot2-framework.
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