inst/shinyappLite/dependencies.R

In kuppal2/xmsPANDA: R Package for Biomarker Discovery, Network, and Data Exploratory Analysis

require('xmsPANDA')
require(RColorBrewer)
require(lsmeans)
#library('car')
require(KEGGREST)
#.libPaths("R/source_codes/library/")
require(shiny)
require(shinyjs)
require(shinyBS)
require(DT)

require(reshape2)
require(statmod)
require(rgl)
require(gplots)

require(cowplot)


require(WGCNA)
require(randomForest)
require(party)
require(qvalue)
require(fdrtool)


require(GeneNet)
require(glmnet)

require('KEGGREST')


require(corpcor)

require(earth)

require(pROC)





require(nlme)
require(multcomp)

require(pls)

require(igraph)

require(ROCR)

require(flashClust)

require(data.table)

require(plyr)

require(mclust)

require(parallel)

require(RColorBrewer)

require(pcaMethods)
require(pamr)
require(GO.db)
require(mixOmics)
require(plsgenomics)
require(limma)
require(e1071)
require(RankAggreg)
require(lsmeans)
require(car)
require(CMA)
require(Boruta)
require(stepPlr)
require(impute)
require(ggpubr)
require(extrafont)
require(sandwich)
require(cluster)
require(h2o)
require(pathview)

require(tidyr)
require(parallel)
require(ggplot2)
require(genefilter)
require(raster)
require(RColorBrewer)
#library(xmsPANDA)
require(gplots)
require(shinycssloaders)
require(reshape2)
require(mvoutlier)
require(robust) 



#