NEWS.md

In kwanjeeraw/grinn: graph database and R package for omics data integration

Features

version 2.8 (13/10/16)

• Include partial correlation analysis

version 2.7 (16/03/16)

• New look of graphical user interface (GUI)

version 2.6 (31/01/16)

• Include graphical user interface (GUI) with shiny

version 2.5 (12/01/16)

• Change parameter names in all correlation-related functions
• Update manual
• Bug fixed

version 2.4 (07/01/16)

• Improve query speed
• Change parameters

version 2.3 (22/09/15)

• Saccharomyces cerevisiae database V.1 incorporating data from KEGG, SMPDB, REACTOME, CheBI, UniProt and ENSEMBL.
• Escherichia coli k-12 database V.1 incorporating data from KEGG, SMPDB, CheBI and UniProt.
• Bug fixed, return number of edges
• Include functions to get and set Grinn database location
• Include a dataset for the tutorial

version 2.2 (18/06/15)

• Arabidopsis database V.1 incorporating data from KEGG, SMPDB, REACTOME, CheBI, and UniProt.
• Add node attributes to correlation networks

version 2.1 (03/06/15)

• Exclude organism specific
• Mouse database V.1 incorporating data from KEGG, SMPDB, REACTOME, CheBI, UniProt and ENSEMBL.

version 2.0 (13/05/15)

• Completely redesigned version of grinnWeb
• Human database V.1 incorporating data from KEGG, SMPDB, HMDB, REACTOME, CheBI, UniProt and ENSEMBL
• Initial grinn R package

kwanjeeraw/grinn documentation built on May 20, 2019, 7:07 p.m.