getFixCoeff: Get outputs of LMM fitting and chi-square test
In kwanjeeraw/lmm2met: Linear mixed-effects modeling to improve clinical metabolomics information
Description
Usage
Arguments
Details
Value
Author(s)
References
See Also
Examples
Description
Get fixed-effects coefficients and p-values from chi-square test.
Usage
1
getFixCoeff(x, save=TRUE)
Arguments
x
lmm2met object from fitLmm
save
logical; export to csv file, defaut = TRUE
Details
The function summarizes outputs from summary and drop1 function.
These include overall means of measured variables (Intercept), coefficients of fixed effects and
significance levels (Pr(Chi)) from chi-square tests.
Value
a dataframe
Author(s)
Kwanjeera W kwanjeera.wan@mahidol.ac.th
References
https://cran.r-project.org/web/packages/lme4/index.html
See Also
Examples
1
2
3
#fitMet = fitLmm(fix=c('Sex','Age','BMI','Stage','Location','Tissue'),
#random='(1|Id)', data=adipose, start=10, end=14)
#getFixCoeff(fitMet)
kwanjeeraw/lmm2met documentation built on May 14, 2019, 3:07 a.m.
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Description Usage Arguments Details Value Author(s) References See Also Examples
Description
Get fixed-effects coefficients and p-values from chi-square test.
Usage
1 | getFixCoeff(x, save=TRUE)
|
Arguments
x |
|
save |
logical; export to csv file, |
Details
The function summarizes outputs from summary and drop1 function.
These include overall means of measured variables (Intercept), coefficients of fixed effects and
significance levels (Pr(Chi)) from chi-square tests.
Value
a dataframe
Author(s)
Kwanjeera W kwanjeera.wan@mahidol.ac.th
References
https://cran.r-project.org/web/packages/lme4/index.html
See Also
Examples
1 2 3 | #fitMet = fitLmm(fix=c('Sex','Age','BMI','Stage','Location','Tissue'),
#random='(1|Id)', data=adipose, start=10, end=14)
#getFixCoeff(fitMet)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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