agridat: Agricultural Datasets

pearl.kernels

R Documentation

Counts of yellow/white and sweet/starchy maize kernels by 15 observers

Description

Counts of yellow/white and sweet/starchy kernels on each of 4 maize ears by 15 observers.

Format

A data frame with 59 observations on the following 6 variables.

ear: ear, 8-11
obs: observer, 1-15
ys: number of yellow starchy kernels
yt: yellow sweet
ws: white starchy
wt: white sweet

Details

An ear of white sweet corn was crossed with an ear of yellow starchy corn. The F1 kernels of the cross were grown and a sample of four ears was harvested. The F2 kernels of these ears were classified by each of 15 observers into white/yellow and sweet/starchy.

By Mendelian genetics, the kernels should occur in the ratio 9 yellow starch, 3 white starch, 3 yellow sweet, 1 white sweet.

The observers had the following positions:

1	Plant pathologist
2	Asst plant pathologist
3	Prof agronomy
4	Asst prof agronomy
5	Prof philosophy
6	Biologist
7	Biologist
8	Asst biologist
9	Computer
10	Farmer
11	Prof plant physiology
12	Instructor plant physiology
13	Asst plant physiology
14	Asst plant physiology
15	Prof biology

Source

Raymond Pearl, 1911. The Personal Equation In Breeding Experiments Involving Certain Characters of Maize, Biol. Bull., 21, 339-366. https://www.biolbull.org/cgi/reprint/21/6/339.pdf

Examples

## Not run: 

library(agridat)

data(pearl.kernels)
dat <- pearl.kernels

libs(lattice)
xyplot(ys+yt+ws+wt~obs|ear, dat, type='l', as.table=TRUE,
       auto.key=list(columns=4),
       main="pearl.kernels", xlab="observer",ylab="kernels",
       layout=c(4,1), scales=list(x=list(rot=90)))

# Test hypothesis that distribution is 'Mendelian' 9:3:3:1
dat$pval <- apply(dat[, 3:6], 1, function(x)
                  chisq.test(x, p=c(9,3,3,1)/16)$p.val)
dotplot(pval~obs|ear, dat, layout=c(1,4), main="pearl.kernels",
        ylab="P-value for test of 9:3:3:1 distribution")


## End(Not run)

kwstat/agridat documentation built on Nov. 2, 2024, 6:19 a.m.