forward_sim_func_wrap: Wrapper function to perform forward simulations

In kylieainslie/vacamole: Deterministic Age-Structured SEIR model with Vaccination

Wrapper function to perform forward simulations

Description

Wrapper function to perform forward simulations

Usage

forward_sim_func_wrap(
  params,
  start_date,
  end_date,
  init_cond,
  beta_m,
  vac_inputs,
  beta_c,
  beta_d,
  t_normal,
  contact_matrices,
  tag
)

Arguments

params	List of model input parameters.
start_date	Start date of simulations (character string in YYYY-MM-DD format)
end_date	End date of simulations (character string in YYYY-MM-DD format)
init_cond	Named vector of initial conditions for model compartments
beta_m	Transmission rate mean.
vac_inputs	Vaccination inputs for model. This should be the output of convert_vac_schedule().
beta_c	Transmission rate when contact matrix changes to pre-pandemic (time > t_normal)
beta_d	Transmission rate draws for determining uncertainty around the mean transmission rate
t_normal	Time point to force model to switch to pre-pandemic contact matrix
contact_matrices	List of contact matrices
tag	Character string of name of output file

Value

Data frame of model outputs for each simulation

kylieainslie/vacamole documentation built on Oct. 15, 2024, 10:17 a.m.