imaap_model_plot: Distribution plot with the gaussian model fit

Description Usage Arguments Value

View source: R/imaap_model_plot.R

Description

The fuction plots the distribution for every marker along with the gaussian model fit.

Usage

1
imaap_model_plot(data, peaks_low, peaks_high, SD)

Arguments

data

Dataframe of data (natural scale) containing samples as rows and markers as columns.

peaks_low

Mean expression value of the left most distribution in the gaussian fit

peaks_high

Mean expression value of the left most distribution in the gaussian fit

SD

Standard Deviation. Default is set to 3. This determines to what extend of the data distribution is considered as positive to marker expression. If your data distribution is clearly not bi-modal, it is suggested to be conservative in the selection of an SD value.

Value

Plots


labsyspharm/IMAAP documentation built on Nov. 4, 2019, 4:15 p.m.