callStates: Calls cell states according to a marker -> cell state mapping
In labsyspharm/naivestates: Cell state calling using Naive Bayes
Description
Usage
Arguments
Value
Description
Calls cell states according to a marker -> cell state mapping
Usage
1
callStates(P, cid, mct)
Arguments
P
Posterior probabilities, as generated by GMMreshape()
cid
Column containing cell IDs
mct
A data frame with columns Marker and State, defining the mapping between the two
Value
The original dataframe P augmented with a State column
labsyspharm/naivestates documentation built on May 27, 2021, 7:19 p.m.
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Description Usage Arguments Value
Description
Calls cell states according to a marker -> cell state mapping
Usage
1 | callStates(P, cid, mct)
|
Arguments
P |
Posterior probabilities, as generated by GMMreshape() |
cid |
Column containing cell IDs |
mct |
A data frame with columns Marker and State, defining the mapping between the two |
Value
The original dataframe P augmented with a State column
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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