findMarkers: Finds markers among a vector of names

In labsyspharm/naivestates: Cell state calling using Naive Bayes

Description

Finds markers among a vector of names

Usage

findMarkers(
  v,
  mrk,
  sfx = "",
  errOnNotFound = FALSE,
  errOnNonUnique = FALSE,
  verbose = FALSE
)

Arguments

v	- vector of names to examine
mrk	- vector of markers to search for, or path to a file containing one marker name per line
sfx	- common suffix on all marker columns
errOnNotFound	- what to do when a requested marker is not found: TRUE - throw an error; FALSE (default) - exclude from results
errOnNonUnique	- what to do when a mapping is not unique: TRUE - throw an error; FALSE (default) - return the first match
verbose	- whether to display additional messages (default: FALSE)

Value

A named vector of matches between v and mrk

labsyspharm/naivestates documentation built on May 27, 2021, 7:19 p.m.