gatingModuleGGOutput: Output module for popHeatmapGG

Description Usage Arguments Value

View source: R/gatingModules.R

Description

Output module for popHeatmapGG

Usage

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gatingModuleGGOutput(input, output, session, imageDir, popTable, displayNodes,
  annotation, annotCols, plotObj, popSubsets, objId, mapVar)

Arguments

input

- Shiny input object

output

- Shiny

session

- Shiny

imageDir

- image directory for gating images

popTable

- population table

displayNodes

- populations to show in shiny UI. Derived from 'gatingObj'

annotation

- annotation. Usually derived from 'gatingObj'

annotCols

- column names in annotation to expose

plotObj

- reactive data object that contains the gating graph to display (generated by 'gatingModuleOutputGGFromGO')

popSubsets

- named list of population subsets. Each slot should contain a vector of populations in displayNodes

mapVar

- single named character that maps popTable into annotation.

Value

shiny output module


laderast/flowDashboard documentation built on May 20, 2019, 7:33 p.m.