API for laduplessis/beastio
Functions for pre- and post-processing of BEAST and BEAST2 files.
| Global functions | |
|---|---|
| applyMCMC | Man page Source code |
| checkESS | Man page Source code |
| checkESSl | Man page Source code |
| constantPars | Man page Source code |
| constantParsMCMC | Man page Source code |
| effectiveSize | Man page Source code |
| getBranchingTimes | Man page Source code |
| getCladeHeight | Man page Source code |
| getCladeMonophyly | Man page Source code |
| getHPD.boa | Man page Source code |
| getHPDMedian | Man page Source code |
| getLineages | Man page Source code |
| getLogFileSubset | Man page Source code |
| getMatrixHPD.boa | Man page Source code |
| getMonths | Man page Source code |
| getSamplingTimes | Man page Source code |
| getTreeIntervals | Man page Source code |
| getTreeIntervalsSlow | Man page Source code |
| getWeeks | Man page Source code |
| hello | Man page |
| pairwiseCorrelations | Man page Source code |
| plotESS | Man page Source code |
| plotPairwiseCorrelations | Source code |
| readLog | Man page Source code |
| readSingleLog | Man page Source code |
| readTreeLog | Man page Source code |
| sampledPars | Man page Source code |
| treeDFSSlow | Man page Source code |
| writeLog | Man page Source code |
