Files in laduplessis/beastio
Functions for pre- and post-processing of BEAST and BEAST2 files.
.gitignore
DESCRIPTION
NAMESPACE
R/date_utils.R
R/log_utils.R
R/tree_utils.R
README.md
man/applyMCMC.Rd
man/checkESS.Rd
man/checkESSl.Rd
man/constantPars.Rd
man/constantParsMCMC.Rd
man/effectiveSize.Rd
man/getBranchingTimes.Rd
man/getCladeHeight.Rd
man/getCladeMonophyly.Rd
man/getHPD.boa.Rd
man/getHPDMedian.Rd
man/getLineages.Rd
man/getLogFileSubset.Rd
man/getMatrixHPD.boa.Rd
man/getMonths.Rd
man/getSamplingTimes.Rd
man/getTreeIntervals.Rd
man/getTreeIntervalsSlow.Rd
man/getWeeks.Rd
man/hello.Rd
man/pairwiseCorrelations.Rd
man/plotESS.Rd
man/readLog.Rd
man/readSingleLog.Rd
man/readTreeLog.Rd
man/sampledPars.Rd
man/treeDFSSlow.Rd
man/writeLog.Rd
tests/testTree1.tree
tests/testTree2.tree
tests/testTree3.tree
tests/testTree4.tree
tests/testTree5.tree
tests/testthat.R
tests/testthat/testTreeIntervals.R
