This package allows to efficiently obtain count vectors from indexed bam files. It counts the number of reads in given genomic ranges and it computes reads profiles and coverage profiles. It also handles paired-end data.
|Author||Alessandro Mammana [aut, cre], Johannes Helmuth [aut]|
|Bioconductor views||Alignment Coverage DataImport Sequencing|
|Maintainer||Alessandro Mammana <[email protected]>|
|Package repository||View on GitHub|
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