Files in lanagarmire/Granatum

Graphical Single-Cell RNA-Seq Analysis Pipeline for Genomics Scientists

.Rbuildignore

.gitignore

DESCRIPTION

LICENSE.txt

NAMESPACE

R/diff_exp.R R/geneOntologyAnalysis.R R/keggAnalysis.R R/monocle.R R/nodesDiffExp.R R/subsampling_PCA.R README.md

custom_analytics.js

dev.r doc/Granatum_manual_0.92.pdf

doc/Kim_et_al_2016_datasets/Combined_expression.csv

doc/Kim_et_al_2016_datasets/Combined_metadata.csv

doc/Kim_et_al_2016_datasets/Expression_1.csv

doc/Kim_et_al_2016_datasets/Expression_2.csv

doc/Kim_et_al_2016_datasets/Expression_3.csv

doc/Kim_et_al_2016_datasets/Metadata_1.csv

doc/Kim_et_al_2016_datasets/Metadata_2.csv

doc/Kim_et_al_2016_datasets/Metadata_3.csv

doc/Kim_et_al_2016_datasets/kim_SNV.csv

google_analytics.js

granatum.Rproj

installDependencies.r load_dependencies.R

machine_setup.sh

main.css

makefile

package-lock.json

ppi/human.RDS

ppi/mouse.RDS

ppi/mouse_bk.RDS

server.R

server/.gitignore

server/.jsbeautifyrc

server/.tern-project

server/app.js

server/clearBookmarksJob.js

server/package-lock.json

server/package.json

shiny.R tests/testthat.R tests/testthat/test-nodesdiffexp.R tidy.R ui.R

www/favicon.ico

www/granatum_logo.svg

www/table_format.svg

lanagarmire/Granatum documentation built on May 21, 2019, 1:44 a.m.