Man pages for laurabiggins/GOcategoryStats
Provides statistics for Gene Ontology categories (Title Case)

bar_plotbar_plot
bg_genesSet of background genes
chromosomesSet of chromosome data
clean_textClean text
density_plotdensity_plot
extract_gene_namesExtract gene names from GTF
genes_1Set of mouse genes
get_chromosomesget_chromosomes.
get_chr_percentageget_chr_percentage
get_count_matrixget_count_matrix.
get_GO_infoGet information on selected gene ontology categories.
get_GO_setsget_GO_sets.
get_lengthsGet lengths of genes.
helloHello, World!
import_GTFImport GTF file.
m_musculusMouse genome annotations
overrep_testoverrep_test
parse_GTF_infoProcess GTF file.
process_GMTImport and process GMT file.
remove_duplicatesremove_duplicates
suspects1Gene set functional categories.
laurabiggins/GOcategoryStats documentation built on Oct. 27, 2019, 11:36 a.m.