BootPlot: Plot a 'BootPlot' of a Bootstrap object

In lauzingaretti/kimod: A k-tables approach to integrate multiple Omics-Data

Description

Plot a BootPlot of a Bootstrap object

Usage

## S4 method for signature 'Bootstrap'
BootPlot(x,xlabProj=NULL, ylabProj=
NULL,mainProj=NULL,legend=TRUE,colour=NULL,
xlimi=NULL,ylimi=NULL,Points=TRUE,...)

Arguments

x	object of Bootstrap-Class
xlabProj	character for the x-label title for plot
ylabProj	character for the x-label title for plot
mainProj	main to proj plot
legend	Logical. It indicates whether the legend prints
colour	colours for ellipsis
xlimi	bounds of x-axis
ylimi	bounds of y-axis
Points	logical if is true, the points are plotted
...	additional parameters for plot (generics)

Value

plotted Bootplot/s of the component/s of the given Bootstrap object.

Author(s)

M L Zingaretti, J A Demey-Zambrano, J L Vicente Villardon, J R Demey

See Also

CompPlot, TrajPlot,

Examples

Z2<-DiStatis(NCI60Selec,Scale=TRUE,Center=TRUE)
 M<-Bootstrap(Z2)
if (interactive()) {
 BootPlot(M)
 }
 Colores2<-c(rep(colors()[657],5),rep(colors()[637],6),rep(colors()[537],7),
 rep(colors()[552],6),rep(colors()[57],10),rep(colors()[300],8),
 rep(colors()[461],7),rep(colors()[450],2),rep(colors()[432],7))
 Colores1<-c(rep("Breast",5),rep("CNS",6),rep("Colon",7),
 rep("Leukemia",6),rep("Melanoma",10),rep("Lung",8),rep("Ovarian",7),
 rep("Prostate",2),rep("Renal",7))
 BootPlot(M,Points=FALSE,cex.lab=0.7,cex.axis=0.7,
 las=1,xlimi=c(-0.003,0.002),ylimi=c(-0.005,0.007)
 ,legend=FALSE,col=Colores2)
 legend("topleft",unique(Colores1),col=unique(Colores2),
 bty="n",pch=16,cex=1)

lauzingaretti/kimod documentation built on May 25, 2019, 5:01 a.m.