aggr_metadata: Aggregate metadata

In lazappi/clustree: Visualise Clusterings at Different Resolutions

Aggregate metadata

Description

Aggregate a metadata column to get a summarized value for a cluster node

Usage

aggr_metadata(node_data, col_name, col_aggr, metadata, is_cluster)

Arguments

node_data	data.frame containing information about a set of cluster nodes
col_name	the name of the metadata column to aggregate
col_aggr	string naming a function used to aggregate the column
metadata	data.frame providing metadata on samples
is_cluster	logical vector indicating which rows of metadata are in the node to be summarized

Value

data.frame with aggregated data

lazappi/clustree documentation built on Nov. 9, 2023, 7:54 p.m.