postProcessBeta: postProcessBeta
In lch14forever/BEEM: BEEM: Estimating Lotka-Volterra models from time-course microbiome sequencing data
postProcessBeta R Documentation
postProcessBeta
Description
Function to filter small interactions. Small interaction is defined relative to the mean of the diagonal of the matrix
Usage
postProcessBeta(beta, thre_pos = 0.001, thre_neg = 0.001)
Arguments
beta
interaction matrix estimated with BLASSO
thre_pos
threshold used to remove small positive interactions (default 1e-3 * slef interaction)
thre_neg
threshold used to remove small negative interactions (default 1e-3 * slef interaction)
lch14forever/BEEM documentation built on April 5, 2025, 11:24 p.m.
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| postProcessBeta | R Documentation |
postProcessBeta
Description
Function to filter small interactions. Small interaction is defined relative to the mean of the diagonal of the matrix
Usage
postProcessBeta(beta, thre_pos = 0.001, thre_neg = 0.001)
Arguments
beta |
interaction matrix estimated with BLASSO |
thre_pos |
threshold used to remove small positive interactions (default 1e-3 * slef interaction) |
thre_neg |
threshold used to remove small negative interactions (default 1e-3 * slef interaction) |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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