Description Usage Arguments Value Author(s)
annotate a ggtree plot to highlight certain clades
1 2 3 4 5 6 7 8 | clade.anno(
gtree,
anno.data,
alpha = 0.2,
anno.depth = 3,
anno.x = 10,
anno.y = 40
)
|
gtree |
a ggtree object |
anno.data |
a 2 column data.frame of annotation information. It has columns of clade name and color used for highlighting. |
alpha |
alpha parameter for shading |
anno.depth |
more specific clades will be shown on the side |
anno.x |
x position of annotations |
anno.y |
y position of annotations |
a ggtree object
Chenhao Li, Guangchuang Yu, Chenghao Zhu
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