Files in lcrawlab/SINATRA

Sub Image Analysis using Topological Summary Statistics (SINATRA)

LICENSE.md R/RATE.R R/clean_mesh.R R/direction_pruning.R R/ec_computation.R R/generate_directions.R R/gp_inference.R R/gp_landmarking.R R/mesh_functions.R R/metric_curve_simulation.R R/plotting_functions.R R/roc_curve_simulation.R R/shape_reconstruction.R R/simulated_data_generation.R README.Rmd README.md man/Elliptical_Slice_Sampling.Rd man/ExpectationPropagation.Rd man/GaussKernel.Rd man/LaplaceApproximation.Rd man/RATE.Rd man/SqExpKernel.Rd man/calculate_TPR_FPR.Rd man/clean_files.Rd man/color.bar.Rd man/compute_differential_evidence.Rd man/compute_discrete_ec_curve.Rd man/compute_marginal_likelihood.Rd man/compute_marginal_likelihood_gradient.Rd man/compute_rbf_model.Rd man/compute_roc_curve_features.Rd man/compute_roc_curve_modified_vertex.Rd man/compute_roc_curve_teeth.Rd man/compute_roc_curve_teeth_vertex.Rd man/compute_roc_curve_vertex.Rd man/compute_selected_faces_cones.Rd man/compute_selected_vertices_cones.Rd man/compute_standardized_ec_curve.Rd man/convert_off_file.Rd man/create_comparison_matrix_mult_d.Rd man/create_data_normal_fixed.Rd man/create_ec_matrix_mult_d.Rd man/cross.Rd man/difference.Rd man/differentiate_ec_curve.Rd man/feature_vertex_association.Rd man/find_bayesian_variables.Rd man/find_elastic_variables.Rd man/find_lasso_variables.Rd man/find_rate_variables_with_other_sampling_methods.Rd man/generate_ROC_with_coned_directions.Rd man/generate_averaged_ROC_with_coned_directions.Rd man/generate_data_sphere_simulation.Rd man/generate_data_sphere_simulation_baseline.Rd man/generate_equidistributed_cones.Rd man/generate_equidistributed_points.Rd man/generate_gaussian_field.Rd man/generate_normal_complex_fixed.Rd man/get_heat_colors.Rd man/gradGaussKernel.Rd man/gradSqExpKernel.Rd man/integrate_ec_curve.Rd man/inv_quad.Rd man/logistic_log_likelihood.Rd man/matrix_to_simplicial_complex.Rd man/optimize_params_EP.Rd man/probit_log_likelihood.Rd man/process_off_file_v3.Rd man/rbf_gauss.Rd man/rbf_on_grid.Rd man/rbf_predict.Rd man/real_data_summary.Rd man/reconstruct_faces_on_shape.Rd man/reconstruct_vertices_on_shape.Rd man/rodriq.Rd man/sigmoid.Rd man/summarize_vertices.Rd man/update_ec_curve.Rd tests/testthat.R tests/testthat/test_dummy.R