leipzig/berrylogo: A seqLogo Alternative
A berryLogo is a seqLogo alternative developed by Charles C. Berry for "Selection of Target Sites for Mobile DNA Integration in the Human Genome" <http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1664696>. Instead of "information content", the y-axis is the log relative frequency with respect to the background frequency, generated here from the gc_content parameter.
Getting started
Browse package contents
Package details |
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| Author | Jeremy Leipzig <leipzig@gmail.com> |
| Bioconductor views | MotifAnnotation |
| Maintainer | Jeremy Leipzig <leipzig@gmail.com> |
| License | GPL-2 | file LICENSE |
| Version | 0.25 |
| Package repository | View on GitHub |
| Installation |
Install the latest version of this package by entering the following in R:
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