IsoExampleList: Simulated isoform level data set with 5 ordered conditions
In lengning/EBSeqHMM: Bayesian analysis for identifying gene or isoform expression changes in ordered RNA-seq experiments
Description
Format
See Also
Examples
Description
'IsoExampleList' gives the isoform level simulated data with 5 ordered conditions, triplicates for each condition.
The data set was simulated following the Negative Binomial distribution. The parameters of each isoform (mean and overdispersion)
were sampled from the isoform level empirical estimates from an empirical RNA-Seq data set from Thomson lab at Morgridge Institute for
Research.
Format
IsoExampleList is a list with three components. IsoExampleList$IsoExampleData contains a
matrix with 200 isoform (rows) and 15 samples (columns). IsoExampleList$IsoNames contains a vector of isoform names.
IsoformExampleList$IsosGeneNames contains a vector indicating the gene each isoform belongs to.
See Also
GeneExampleData
Examples
1
2
lengning/EBSeqHMM documentation built on May 21, 2019, 4:02 a.m.
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Description Format See Also Examples
Description
'IsoExampleList' gives the isoform level simulated data with 5 ordered conditions, triplicates for each condition. The data set was simulated following the Negative Binomial distribution. The parameters of each isoform (mean and overdispersion) were sampled from the isoform level empirical estimates from an empirical RNA-Seq data set from Thomson lab at Morgridge Institute for Research.
Format
IsoExampleList is a list with three components. IsoExampleList$IsoExampleData contains a matrix with 200 isoform (rows) and 15 samples (columns). IsoExampleList$IsoNames contains a vector of isoform names. IsoformExampleList$IsosGeneNames contains a vector indicating the gene each isoform belongs to.
See Also
GeneExampleData
Examples
1 2 |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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