Man pages for leppott/MBSStools
MBSS tool suite for calculations and data manipulation
| FlowSum | Flow Sum Calculation |
| IonContrib | Ion Matrix Calculation |
| MapTaxaObs | Taxa Observation Maps |
| MBSS.flow | MBSS.flow |
| MBSS.Ion.Data | MBSS.Ion.Data |
| MBSS.Ion.Ref | MBSS.Ion.Ref |
| MBSS.PHI | MBSS.PHI |
| metric.scores | Score metrics |
| metrics_scoring | metrics_scoring |
| metric.values | Calculate metric values |
| metric.values.algae | Calculate Metric Values for Algae |
| metric.values.bugs | Calculate Metric Values for Benthic Macroinvertebrates |
| metric.values.fish | Calculate Metric Values for Fish |
| PHIcalc | PHI Calculation |
| qc_taxa | Quality Control Check on User Data Against Master Taxa List |
| runShiny | run MBSStools Shiny Example |
| shp_strata_bugs | GIS shapefile, MBSS strata, bugs |
| shp_strata_fish | GIS shapefile, MBSS strata, fish |
| shp_strata_msw | GIS shapefile, MBSS (MSW) strata, bugs |
| strata | Assign MBSS strata |
| taxa_bugs_family | taxa_bugs_family |
| taxa_bugs_genus | taxa_bugs_genus |
| taxa_fish | taxa_fish |
