FlowSum | Flow Sum Calculation |
IonContrib | Ion Matrix Calculation |
MapTaxaObs | Taxa Observation Maps |
MBSS.flow | MBSS.flow |
MBSS.Ion.Data | MBSS.Ion.Data |
MBSS.Ion.Ref | MBSS.Ion.Ref |
MBSS.PHI | MBSS.PHI |
metric.scores | Score metrics |
metrics_scoring | metrics_scoring |
metric.values | Calculate metric values |
metric.values.algae | Calculate Metric Values for Algae |
metric.values.bugs | Calculate Metric Values for Benthic Macroinvertebrates |
metric.values.fish | Calculate Metric Values for Fish |
PHIcalc | PHI Calculation |
qc_taxa | Quality Control Check on User Data Against Master Taxa List |
runShiny | run MBSStools Shiny Example |
shp_strata_bugs | GIS shapefile, MBSS strata, bugs |
shp_strata_fish | GIS shapefile, MBSS strata, fish |
shp_strata_msw | GIS shapefile, MBSS (MSW) strata, bugs |
strata | Assign MBSS strata |
taxa_bugs_family | taxa_bugs_family |
taxa_bugs_genus | taxa_bugs_genus |
taxa_fish | taxa_fish |
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