createUniquePeptideDbRds | R Documentation |
This function creates an RDS file to store the
“Unique Peptides Database” for future runs of
synergise
or Synapter
.
createUniquePeptideDbRds(fastaFile, outputFile = paste0(fastaFile, ".rds"), missedCleavages = 0, IisL = FALSE, verbose = interactive())
fastaFile |
file path of the input fasta file |
outputFile |
file path of the target RDS file; must have the file extension ".rds" |
missedCleavages |
Number of maximal allowed missed cleavages. Default is 0. |
IisL |
If |
verbose |
If |
Sebastian Gibb <mail@sebastiangibb.de>
Synapter
for details about the cleavage
procedure.
## Not run: createUniquePeptideDbRds("uniprot.fasta", "uniprot.fasta.rds") ## End(Not run)
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.