Man pages for lgeistlinger/EnrichmentBrowser
Seamless navigation through combined results of set-based and network-based enrichment analysis
| combResults | Combining enrichment analysis results |
| compileGRN | Compilation of a gene regulatory network from pathway... |
| configEBrowser | Configuring the EnrichmentBrowser |
| deAna | Differential expression analysis between two sample groups |
| downloadPathways | Download of KEGG pathways for a particular organism |
| eaBrowse | Exploration of enrichment analysis results |
| ebrowser | Seamless navigation through enrichment analysis results |
| export | Export results from set- and network-based enrichment... |
| getGenesets | Definition of gene sets according to different sources |
| ggeaGraph | GGEA graphs of consistency between regulation and expression |
| idMap | Mapping between gene ID types |
| import | Import results from differential expression (DE) analysis |
| isAvailable | Is a required package available? |
| makeExampleData | Example data for the EnrichmentBrowser package |
| nbea | Network-based enrichment analysis (NBEA) |
| normalize | Normalization of microarray and RNA-seq expression data |
| plots | Visualization of gene expression |
| probe2gene | Transformation of probe level expression to gene level... |
| readSE | Reading gene expression data from file |
| sbea | Set-based enrichment analysis (SBEA) |
