SKAT test for two or more random components

Global functions | |
---|---|

Beta.Weights | Source code |

FaST.add | Source code |

GWAS | Source code |

Get_BetaMAF | Source code |

Get_CausalSNPs | Source code |

Get_Davies_PVal | Source code |

Get_Lambda | Source code |

Get_Lambda_U_From_Z | Source code |

Get_Liu_PVal | Source code |

Get_Liu_PVal.MOD | Source code |

Get_Liu_PVal.MOD.Lambda | Source code |

Get_Liu_PVal.MOD.Lambda.Zero | Source code |

Get_Liu_Params | Source code |

Get_Liu_Params_Mod | Source code |

Get_Liu_Params_Mod_Lambda | Source code |

Get_Logistic_Weights | Source code |

Get_Logistic_Weights_MAF | Source code |

Get_MAF | Source code |

Get_Matrix_Square.1 | Source code |

Get_PValue | Source code |

Get_PValue.Lambda | Source code |

Get_Resampling_Bin | Source code |

Get_Satterthwaite | Source code |

Get_testSNPsMAF | Source code |

Impute | Source code |

LHSForm | Source code |

Meff | Source code |

Meff.lambda | Source code |

RHSForm | Source code |

SKAT_Get_Polymorphic_SNP | Source code |

SKAT_davies | Source code |

SKAT_liu | Source code |

SKAT_liu.MOD | Source code |

asCall | Source code |

checkNA | Source code |

checkVar | Source code |

colmult | Source code |

findCallPattern | Source code |

findTrueTerms | Source code |

findterms | Source code |

fitNULL | Source code |

fitNULL.FaST | Source code |

getDL | Source code |

getEigenG | Source code |

getFaST | Source code |

getPower | Source code |

getPower.singleSNP | Source code |

getPower.window | Source code |

getSetsSNPID | Source code |

getSetsSNPID.StartEnd | Source code |

get_results | Source code |

meanImpute | Source code |

neg2Log | Source code |

noCallPattern | Source code |

onUnload | Source code |

print.GWAS | Source code |

print.lmm | Source code |

readLinesListf | Source code |

replaceTerm | Source code |

simu.XF_R | Source code |

simu.XF_StN | Source code |

simuBeta | Source code |

simuPower | Source code |

simu_ug.QTL | Source code |

simu_ug.eigenG | Source code |

subflags | Source code |

sweep_prod | Source code |

testX | Source code |

testZ | Source code |

tr | Source code |

updateFaST.X | Source code |

updateFaST.Ztest | Source code |

updateFaST.Zw | Source code |

updatefitNULLFaST | Source code |

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