API for lian0090/SKAT2
SKAT test for two or more random components

Global functions
Beta.Weights Source code
FaST.add Source code
GWAS Source code
Get_BetaMAF Source code
Get_CausalSNPs Source code
Get_Davies_PVal Source code
Get_Lambda Source code
Get_Lambda_U_From_Z Source code
Get_Liu_PVal Source code
Get_Liu_PVal.MOD Source code
Get_Liu_PVal.MOD.Lambda Source code
Get_Liu_PVal.MOD.Lambda.Zero Source code
Get_Liu_Params Source code
Get_Liu_Params_Mod Source code
Get_Liu_Params_Mod_Lambda Source code
Get_Logistic_Weights Source code
Get_Logistic_Weights_MAF Source code
Get_MAF Source code
Get_Matrix_Square.1 Source code
Get_PValue Source code
Get_PValue.Lambda Source code
Get_Resampling_Bin Source code
Get_Satterthwaite Source code
Get_testSNPsMAF Source code
Impute Source code
LHSForm Source code
Meff Source code
Meff.lambda Source code
RHSForm Source code
SKAT_Get_Polymorphic_SNP Source code
SKAT_davies Source code
SKAT_liu Source code
SKAT_liu.MOD Source code
asCall Source code
checkNA Source code
checkVar Source code
colmult Source code
findCallPattern Source code
findTrueTerms Source code
findterms Source code
fitNULL Source code
fitNULL.FaST Source code
getDL Source code
getEigenG Source code
getFaST Source code
getPower Source code
getPower.singleSNP Source code
getPower.window Source code
getSetsSNPID Source code
getSetsSNPID.StartEnd Source code
get_results Source code
meanImpute Source code
neg2Log Source code
noCallPattern Source code
onUnload Source code
print.GWAS Source code
print.lmm Source code
readLinesListf Source code
replaceTerm Source code
simu.XF_R Source code
simu.XF_StN Source code
simuBeta Source code
simuPower Source code
simu_ug.QTL Source code
simu_ug.eigenG Source code
subflags Source code
sweep_prod Source code
testX Source code
testZ Source code
tr Source code
updateFaST.X Source code
updateFaST.Ztest Source code
updateFaST.Zw Source code
updatefitNULLFaST Source code
lian0090/SKAT2 documentation built on May 21, 2017, 1:33 p.m.