API for lin-lab/iSKAT-GESAT
interaction Sequence/SNP-set Kernel Association Test (iSKAT) / Gene-Environment Set Association Test (GESAT)
| Global functions | |
|---|---|
| Beta.Weights | Source code |
| GESAT | Man page Source code |
| GESAT.SSD.All | Man page Source code |
| GESAT.SSD.OneSet | Man page Source code |
| GESAT.SSD.OneSet_SetIndex | Man page Source code |
| Get_Lambda | Source code |
| Get_Liu_PVal.MOD.Lambda_iSKAT | Source code |
| Get_Liu_Params_Mod_Lambda_iSKAT | Source code |
| Get_PValue.Lambda_iSKAT | Source code |
| Get_PValue_GESAT | Source code |
| GxEscore.linear.GCV | Source code |
| GxEscore.logistic.GCV | Source code |
| Impute_iSKAT | Source code |
| SKAT_davies | Source code |
| checkpolymorphic | Source code |
| checkvariation | Source code |
| checkvariation2 | Source code |
| chooseridge.linear | Source code |
| chooseridge.logistic | Source code |
| iSKAT | Man page Source code |
| iSKAT.SSD.All | Man page Source code |
| iSKAT.SSD.OneSet | Man page Source code |
| iSKAT.SSD.OneSet_SetIndex | Man page Source code |
| iSKAT.linear | Source code |
| iSKAT.logistic | Source code |
| iSKAT_Get_Liu_Params_Mod | Source code |
| iSKAT_MAIN_Check_Z | Source code |
| iSKAT_MAIN_Check_Z_and_V | Source code |
| iSKAT_Optiaml_Each_Q | Source code |
| iSKAT_Optimal_Get_Pvalue | Source code |
| iSKAT_Optimal_Get_Q | Source code |
| iSKAT_Optimal_Integrate_Func_Davies | Source code |
| iSKAT_Optimal_Integrate_Func_Liu | Source code |
| iSKAT_Optimal_Linear | Source code |
| iSKAT_Optimal_Logistic | Source code |
| iSKAT_Optimal_PValue_Davies | Source code |
| iSKAT_Optimal_PValue_Liu | Source code |
| iSKAT_Optimal_Param | Source code |
| kurtosis | Source code |
| mafcall | Source code |
| mtrace | Source code |
| noncentralapproxdirect | Source code |
| qqplots | Source code |
| qqplotspdf | Source code |
| qqplotspdfNA | Source code |
| ridge.linear | Source code |
| ridge.logistic | Source code |
| ridge.select.linear | Source code |
| ridge.select.logistic | Source code |
| skewness | Source code |
