API for lin-lab/iSKAT-GESAT
interaction Sequence/SNP-set Kernel Association Test (iSKAT) / Gene-Environment Set Association Test (GESAT)

Global functions
Beta.Weights Source code
GESAT Man page Source code
GESAT.SSD.All Man page Source code
GESAT.SSD.OneSet Man page Source code
GESAT.SSD.OneSet_SetIndex Man page Source code
Get_Lambda Source code
Get_Liu_PVal.MOD.Lambda_iSKAT Source code
Get_Liu_Params_Mod_Lambda_iSKAT Source code
Get_PValue.Lambda_iSKAT Source code
Get_PValue_GESAT Source code
GxEscore.linear.GCV Source code
GxEscore.logistic.GCV Source code
Impute_iSKAT Source code
SKAT_davies Source code
checkpolymorphic Source code
checkvariation Source code
checkvariation2 Source code
chooseridge.linear Source code
chooseridge.logistic Source code
iSKAT Man page Source code
iSKAT.SSD.All Man page Source code
iSKAT.SSD.OneSet Man page Source code
iSKAT.SSD.OneSet_SetIndex Man page Source code
iSKAT.linear Source code
iSKAT.logistic Source code
iSKAT_Get_Liu_Params_Mod Source code
iSKAT_MAIN_Check_Z Source code
iSKAT_MAIN_Check_Z_and_V Source code
iSKAT_Optiaml_Each_Q Source code
iSKAT_Optimal_Get_Pvalue Source code
iSKAT_Optimal_Get_Q Source code
iSKAT_Optimal_Integrate_Func_Davies Source code
iSKAT_Optimal_Integrate_Func_Liu Source code
iSKAT_Optimal_Linear Source code
iSKAT_Optimal_Logistic Source code
iSKAT_Optimal_PValue_Davies Source code
iSKAT_Optimal_PValue_Liu Source code
iSKAT_Optimal_Param Source code
kurtosis Source code
mafcall Source code
mtrace Source code
noncentralapproxdirect Source code
qqplots Source code
qqplotspdf Source code
qqplotspdfNA Source code
ridge.linear Source code
ridge.logistic Source code
ridge.select.linear Source code
ridge.select.logistic Source code
skewness Source code
lin-lab/iSKAT-GESAT documentation built on Nov. 18, 2017, 5:08 p.m.