medtab: Lisa's Median Survival Table

In lisaerein/nicesurv: This package creates a nice summary tables and plots for survival analysis

Lisa's Median Survival Table

Description

This function creates a summary table from a survfit object including median survival estimates with CIs. It returns a dataframe and prints a table using kable or htmlTable.

Usage

medtab(
  sfit,
  groups = NA,
  grlabs = NA,
  grcolname = "Group",
  med.dec = 2,
  medlab = "Median survival time",
  printorig = TRUE,
  kable = TRUE,
  htmlTable = FALSE
)

Arguments

sfit	Survfit object (REQUIRED).
groups	Character vector for groups as listed in dataset. Default = NA (no groups).
grlabs	Character vector for group names, must be in same order as groups. Default = NA (no groups or use group levels from dataset).
grcolname	Character label for group column. Default = "Group".
med.dec	Number of decimal places to report for median survival time. Default = 2.
medlab	Character label for median and CI columns. Default = "Median survival time".
printorig	Logical indicator to print original summary of survfit object for checking purposes. Default = TRUE.
kable	Logical. Indicator to use kable to display table. Default = TRUE.
htmlTable	Logical. Indicator to use htmlTable package to display table instead of kable Default = FALSE.

lisaerein/nicesurv documentation built on Dec. 9, 2024, 12:17 a.m.