getOBO: Read an OBO file
In llrs/BaseSet: Working with Sets the Tidy Way
getOBO R Documentation
Read an OBO file
Description
Read an Open Biological and Biomedical Ontologies (OBO) formatted file
Usage
getOBO(x)
Arguments
x
Path to a file in OBO format.
Value
A TidySet object.
References
The format is described here
See Also
Other IO functions:
getGAF(),
getGMT()
Examples
oboFile <- system.file(
package = "BaseSet", "extdata",
"go-basic_subset.obo"
)
gs <- getOBO(oboFile)
head(gs)
llrs/BaseSet documentation built on Jan. 28, 2024, 9:05 a.m.
R Package Documentation
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| getOBO | R Documentation |
Read an OBO file
Description
Read an Open Biological and Biomedical Ontologies (OBO) formatted file
Usage
getOBO(x)
Arguments
x |
Path to a file in OBO format. |
Value
A TidySet object.
References
The format is described here
See Also
Other IO functions:
getGAF(),
getGMT()
Examples
oboFile <- system.file(
package = "BaseSet", "extdata",
"go-basic_subset.obo"
)
gs <- getOBO(oboFile)
head(gs)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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