lubianat/wcit: Which Cell is That (WCIT) points out the likely cell identity from a list of markers

This package is intended to process list of gene markers detected in single cell studies. The markers from the clusterswill be crossed with databases to determine what is the likely identity of the cells in a given cluster.If you use this package, please cite the original sources of cell markers: PanglaoDB: "Oscar Franzén, Li-Ming Gan, Johan L M Björkegren, PanglaoDB: a web server for exploration of mouse and human single-cell RNA sequencing data, Database, Volume 2019, 2019, baz046, https://doi.org/10.1093/database/baz046" and CellMarker: "Zhang, Xinxin, et al. "CellMarker: a manually curated resource of cell markers in human and mouse." Nucleic acids research 47.D1 (2018): D721-D728."

install.packages("remotes")
remotes::install_github("lubianat/wcit")