Description Usage Arguments Value Author(s) References See Also Examples
Computing the Maximul Likelihood Entropy Estimate of cellCounts
.
1 |
cellCounts |
an integer vector (or matrix) representing the number of times each particular count is obtained. |
unit |
the unit in which entropy is measured. One of |
The entropyML
function returns the value of the entropy of that gene
H(X)
(or pair of genes H(X,Y)
).
Luciano Garofano lucianogarofano88@gmail.com, Stefano Maria Pagnotta, Michele Ceccarelli
Paniski L. (2003). Estimation of Entropy and Mutual Information. Neural Computation, vol. 15 no. 6 pp. 1191-1253.
Meyer P.E., Laffitte F., Bontempi G. (2008). minet: A R/Bioconductor Package for Inferring Large Transcriptional Networks Using Mutual Information. BMC Bioinformatics 9:461.
Antos A., Kontoyiannis I. (2001). Convergence properties of functional estimates for discrete distributions. Random Structures and Algorithms, vol. 19 pp. 163-193.
Strong S., Koberle R., de Ruyter van Steveninck R.R., Bialek W. (1998). Entropy and Information in Neural Spike Trains. Physical Review Letters, vol. 80 pp. 197-202.
entropyMM, entropyBayes,
entropyCS, entropyShrink
1 2 3 4 |
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