gs_multi: Genomic selection fro multiple phenotypes and multiple Models

In luisgarreta/ppGS: Parallel pipeline for Genomic Selection

Description

Function that runs genomic selection in parallel for multiple phenotypes and multiple models.

Usage

gs_multi(configFile, outputDir)

Arguments

configFile

Filename of the parameter file (YAML Format). It includes: trainingGenoFile: Filename of training genotype data, trainingPhenoFile: Filename of training phenotype data, trainingGenoFile: Filename of target genotype table, targetPhenoFile: Filename of target phenotype table (opt.), markersFile: Filename of selected markers to test from genotype (opt.), nMarkers: Number of selected markers to test, methods: Methods or models to test in GS, nTimes: Number of independent replicates for the cross-validation, nFolds: Number of folds for the cross-validation, nCores: Number of cores to use.

outputDir

The directory where the results will be saved.

Value

None

luisgarreta/ppGS documentation built on Jan. 17, 2022, 9:23 p.m.