Man pages for lujunyan1118/jyluMisc
Handy functions for CLL project
| com | Wrapper for coxph |
| fitIC50 | Model object for fitting the IC50 curve |
| glog | Generalized log transformation |
| highCor | Identify highly correlated variables in a dataset |
| km | Wrapper for plotting Kaplan-Meier plot |
| loadData | Load the newst dataset |
| loadRData | Load multiple data function |
| makepdf | Plot a list of ggplot object |
| mscale | Calculate modified row z-scores |
| overlap | Find the intersect of multiple vectors |
| plotEnrichmentBar | Barplot for enrichment analysis result |
| plotHazard | Forest plot for multivariate Cox regression result. Plot the... |
| predict.fitIC50 | Predicted values based on IC50 fit |
| runCamera | Function to run enrichment analysis using Camera from LIMMA |
| runCox | Multivariate Cox regression |
| runGSEA | Function to run enrichment analysis in R |
| tidyToSum | Convert tidy table to SummarizedExperiment object |
