tidyToSum: Convert tidy table to SummarizedExperiment object

In lujunyan1118/jyluMisc: Handy functions for CLL project

Convert tidy table to SummarizedExperiment object

Description

Function for converting a tidy table to SummarizedExperiment object.

Usage

tidyToSum(tidyTable, rowID, colID, values, annoRow, annoCol)

Arguments

tidyTable	Input tidy table
rowID	A character variable specifying the column in the tidy table that should be used as row identifiers in the SE object.
colID	A character variable specifying the column in the tidy table that should be used as column identifiers in the SE object.
values	A character or a vector of characters, specifying the columns that should be treated as measurements (assays).
annoRow	A character or a vector of characters, specifying the columns that should be used a rowData
annoCol	A character or a vector of characters, specifying the columns that should be used a colData.

lujunyan1118/jyluMisc documentation built on March 8, 2024, 12:17 a.m.