DESCRIPTION
NAMESPACE
R/Xdat.R
R/bestcluster.R
R/bkmr_wrapper.R
R/brier.R
R/fitModels.R
R/logsum.R
R/modelaves.R
R/npb.R
R/npb_int.R
R/npb_main.R
R/predict.bpr.R
R/predict.npb.R
R/premium_wrapper.R
R/print.bpr.R
R/print.npb.R
R/print.summary.bpr.R
R/print.summary.npb.R
R/profileReg.R
R/rcat.R
R/recode.Z.R
R/simLinearResponse.R
R/simNonlinearResponse.R
R/simProfilesResponse.R
R/simexpodat.R
R/sumERbayes.R
R/sumERlinearmodels.R
R/summarizeSimulation.R
R/summary.bpr.R
R/summary.npb.R
R/update_S.R
README.md
data/Xdat.RData
man/Xdat.Rd
man/bestcluster.Rd
man/bkmr_wrapper.Rd
man/brier.Rd
man/fitModels.Rd
man/logsum.Rd
man/modelaves.Rd
man/npb.Rd
man/npb_int.Rd
man/npb_main.Rd
man/predict.bpr.Rd
man/predict.npb.Rd
man/premium_wrapper.Rd
man/print.bpr.Rd
man/print.npb.Rd
man/print.summary.bpr.Rd
man/print.summary.npb.Rd
man/profileReg.Rd
man/rcat.Rd
man/recode.Z.Rd
man/simLinearResponse.Rd
man/simNonlinearResponse.Rd
man/simProfilesResponse.Rd
man/simexpodat.Rd
man/sumERbayes.Rd
man/sumERlinearmodels.Rd
man/summarizeSimulation.Rd
man/summary.bpr.Rd
man/summary.npb.Rd
man/update_S.Rd
mmpack.Rproj
vignettes/.DS_Store
vignettes/.build.timestamp
vignettes/Premium_output/output10_Sigma.txt
vignettes/Premium_output/output10_alpha.txt
vignettes/Premium_output/output10_alphaProp.txt
vignettes/Premium_output/output10_beta.txt
vignettes/Premium_output/output10_betaProp.txt
vignettes/Premium_output/output10_entropy.txt
vignettes/Premium_output/output10_gamma.txt
vignettes/Premium_output/output10_hyper.txt
vignettes/Premium_output/output10_input.txt
vignettes/Premium_output/output10_log.txt
vignettes/Premium_output/output10_logPost.txt
vignettes/Premium_output/output10_mu.txt
vignettes/Premium_output/output10_nClusters.txt
vignettes/Premium_output/output10_nMembers.txt
vignettes/Premium_output/output10_nullMu.txt
vignettes/Premium_output/output10_omega.txt
vignettes/Premium_output/output10_predict.txt
vignettes/Premium_output/output10_predictThetaRaoBlackwell.txt
vignettes/Premium_output/output10_psi.txt
vignettes/Premium_output/output10_rho.txt
vignettes/Premium_output/output10_rhoOmegaProp.txt
vignettes/Premium_output/output10_sigmaSqY.txt
vignettes/Premium_output/output10_theta.txt
vignettes/Premium_output/output10_thetaProp.txt
vignettes/Premium_output/output10_z.txt
vignettes/Premium_output/output1_Sigma.txt
vignettes/Premium_output/output1_alpha.txt
vignettes/Premium_output/output1_alphaProp.txt
vignettes/Premium_output/output1_beta.txt
vignettes/Premium_output/output1_betaProp.txt
vignettes/Premium_output/output1_entropy.txt
vignettes/Premium_output/output1_gamma.txt
vignettes/Premium_output/output1_hyper.txt
vignettes/Premium_output/output1_input.txt
vignettes/Premium_output/output1_log.txt
vignettes/Premium_output/output1_logPost.txt
vignettes/Premium_output/output1_mu.txt
vignettes/Premium_output/output1_nClusters.txt
vignettes/Premium_output/output1_nMembers.txt
vignettes/Premium_output/output1_nullMu.txt
vignettes/Premium_output/output1_omega.txt
vignettes/Premium_output/output1_predict.txt
vignettes/Premium_output/output1_predictThetaRaoBlackwell.txt
vignettes/Premium_output/output1_psi.txt
vignettes/Premium_output/output1_rho.txt
vignettes/Premium_output/output1_rhoOmegaProp.txt
vignettes/Premium_output/output1_sigmaSqY.txt
vignettes/Premium_output/output1_theta.txt
vignettes/Premium_output/output1_thetaProp.txt
vignettes/Premium_output/output1_z.txt
vignettes/Premium_output/output2_Sigma.txt
vignettes/Premium_output/output2_alpha.txt
vignettes/Premium_output/output2_alphaProp.txt
vignettes/Premium_output/output2_beta.txt
vignettes/Premium_output/output2_betaProp.txt
vignettes/Premium_output/output2_entropy.txt
vignettes/Premium_output/output2_gamma.txt
vignettes/Premium_output/output2_hyper.txt
vignettes/Premium_output/output2_input.txt
vignettes/Premium_output/output2_log.txt
vignettes/Premium_output/output2_logPost.txt
vignettes/Premium_output/output2_mu.txt
vignettes/Premium_output/output2_nClusters.txt
vignettes/Premium_output/output2_nMembers.txt
vignettes/Premium_output/output2_nullMu.txt
vignettes/Premium_output/output2_omega.txt
vignettes/Premium_output/output2_predict.txt
vignettes/Premium_output/output2_predictThetaRaoBlackwell.txt
vignettes/Premium_output/output2_psi.txt
vignettes/Premium_output/output2_rho.txt
vignettes/Premium_output/output2_rhoOmegaProp.txt
vignettes/Premium_output/output2_sigmaSqY.txt
vignettes/Premium_output/output2_theta.txt
vignettes/Premium_output/output2_thetaProp.txt
vignettes/Premium_output/output2_z.txt
vignettes/Premium_output/output3_Sigma.txt
vignettes/Premium_output/output3_alpha.txt
vignettes/Premium_output/output3_alphaProp.txt
vignettes/Premium_output/output3_beta.txt
vignettes/Premium_output/output3_betaProp.txt
vignettes/Premium_output/output3_entropy.txt
vignettes/Premium_output/output3_gamma.txt
vignettes/Premium_output/output3_hyper.txt
vignettes/Premium_output/output3_input.txt
vignettes/Premium_output/output3_log.txt
vignettes/Premium_output/output3_logPost.txt
vignettes/Premium_output/output3_mu.txt
vignettes/Premium_output/output3_nClusters.txt
vignettes/Premium_output/output3_nMembers.txt
vignettes/Premium_output/output3_nullMu.txt
vignettes/Premium_output/output3_omega.txt
vignettes/Premium_output/output3_predict.txt
vignettes/Premium_output/output3_predictThetaRaoBlackwell.txt
vignettes/Premium_output/output3_psi.txt
vignettes/Premium_output/output3_rho.txt
vignettes/Premium_output/output3_rhoOmegaProp.txt
vignettes/Premium_output/output3_sigmaSqY.txt
vignettes/Premium_output/output3_theta.txt
vignettes/Premium_output/output3_thetaProp.txt
vignettes/Premium_output/output3_z.txt
vignettes/Premium_output/output4_Sigma.txt
vignettes/Premium_output/output4_alpha.txt
vignettes/Premium_output/output4_alphaProp.txt
vignettes/Premium_output/output4_beta.txt
vignettes/Premium_output/output4_betaProp.txt
vignettes/Premium_output/output4_entropy.txt
vignettes/Premium_output/output4_gamma.txt
vignettes/Premium_output/output4_hyper.txt
vignettes/Premium_output/output4_input.txt
vignettes/Premium_output/output4_log.txt
vignettes/Premium_output/output4_logPost.txt
vignettes/Premium_output/output4_mu.txt
vignettes/Premium_output/output4_nClusters.txt
vignettes/Premium_output/output4_nMembers.txt
vignettes/Premium_output/output4_nullMu.txt
vignettes/Premium_output/output4_omega.txt
vignettes/Premium_output/output4_predict.txt
vignettes/Premium_output/output4_predictThetaRaoBlackwell.txt
vignettes/Premium_output/output4_psi.txt
vignettes/Premium_output/output4_rho.txt
vignettes/Premium_output/output4_rhoOmegaProp.txt
vignettes/Premium_output/output4_sigmaSqY.txt
vignettes/Premium_output/output4_theta.txt
vignettes/Premium_output/output4_thetaProp.txt
vignettes/Premium_output/output4_z.txt
vignettes/Premium_output/output5_Sigma.txt
vignettes/Premium_output/output5_alpha.txt
vignettes/Premium_output/output5_alphaProp.txt
vignettes/Premium_output/output5_beta.txt
vignettes/Premium_output/output5_betaProp.txt
vignettes/Premium_output/output5_entropy.txt
vignettes/Premium_output/output5_gamma.txt
vignettes/Premium_output/output5_hyper.txt
vignettes/Premium_output/output5_input.txt
vignettes/Premium_output/output5_log.txt
vignettes/Premium_output/output5_logPost.txt
vignettes/Premium_output/output5_mu.txt
vignettes/Premium_output/output5_nClusters.txt
vignettes/Premium_output/output5_nMembers.txt
vignettes/Premium_output/output5_nullMu.txt
vignettes/Premium_output/output5_omega.txt
vignettes/Premium_output/output5_predict.txt
vignettes/Premium_output/output5_predictThetaRaoBlackwell.txt
vignettes/Premium_output/output5_psi.txt
vignettes/Premium_output/output5_rho.txt
vignettes/Premium_output/output5_rhoOmegaProp.txt
vignettes/Premium_output/output5_sigmaSqY.txt
vignettes/Premium_output/output5_theta.txt
vignettes/Premium_output/output5_thetaProp.txt
vignettes/Premium_output/output5_z.txt
vignettes/Premium_output/output6_Sigma.txt
vignettes/Premium_output/output6_alpha.txt
vignettes/Premium_output/output6_alphaProp.txt
vignettes/Premium_output/output6_beta.txt
vignettes/Premium_output/output6_betaProp.txt
vignettes/Premium_output/output6_entropy.txt
vignettes/Premium_output/output6_gamma.txt
vignettes/Premium_output/output6_hyper.txt
vignettes/Premium_output/output6_input.txt
vignettes/Premium_output/output6_log.txt
vignettes/Premium_output/output6_logPost.txt
vignettes/Premium_output/output6_mu.txt
vignettes/Premium_output/output6_nClusters.txt
vignettes/Premium_output/output6_nMembers.txt
vignettes/Premium_output/output6_nullMu.txt
vignettes/Premium_output/output6_omega.txt
vignettes/Premium_output/output6_predict.txt
vignettes/Premium_output/output6_predictThetaRaoBlackwell.txt
vignettes/Premium_output/output6_psi.txt
vignettes/Premium_output/output6_rho.txt
vignettes/Premium_output/output6_rhoOmegaProp.txt
vignettes/Premium_output/output6_sigmaSqY.txt
vignettes/Premium_output/output6_theta.txt
vignettes/Premium_output/output6_thetaProp.txt
vignettes/Premium_output/output6_z.txt
vignettes/Premium_output/output7_Sigma.txt
vignettes/Premium_output/output7_alpha.txt
vignettes/Premium_output/output7_alphaProp.txt
vignettes/Premium_output/output7_beta.txt
vignettes/Premium_output/output7_betaProp.txt
vignettes/Premium_output/output7_entropy.txt
vignettes/Premium_output/output7_gamma.txt
vignettes/Premium_output/output7_hyper.txt
vignettes/Premium_output/output7_input.txt
vignettes/Premium_output/output7_log.txt
vignettes/Premium_output/output7_logPost.txt
vignettes/Premium_output/output7_mu.txt
vignettes/Premium_output/output7_nClusters.txt
vignettes/Premium_output/output7_nMembers.txt
vignettes/Premium_output/output7_nullMu.txt
vignettes/Premium_output/output7_omega.txt
vignettes/Premium_output/output7_predict.txt
vignettes/Premium_output/output7_predictThetaRaoBlackwell.txt
vignettes/Premium_output/output7_psi.txt
vignettes/Premium_output/output7_rho.txt
vignettes/Premium_output/output7_rhoOmegaProp.txt
vignettes/Premium_output/output7_sigmaSqY.txt
vignettes/Premium_output/output7_theta.txt
vignettes/Premium_output/output7_thetaProp.txt
vignettes/Premium_output/output7_z.txt
vignettes/Premium_output/output8_Sigma.txt
vignettes/Premium_output/output8_alpha.txt
vignettes/Premium_output/output8_alphaProp.txt
vignettes/Premium_output/output8_beta.txt
vignettes/Premium_output/output8_betaProp.txt
vignettes/Premium_output/output8_entropy.txt
vignettes/Premium_output/output8_gamma.txt
vignettes/Premium_output/output8_hyper.txt
vignettes/Premium_output/output8_input.txt
vignettes/Premium_output/output8_log.txt
vignettes/Premium_output/output8_logPost.txt
vignettes/Premium_output/output8_mu.txt
vignettes/Premium_output/output8_nClusters.txt
vignettes/Premium_output/output8_nMembers.txt
vignettes/Premium_output/output8_nullMu.txt
vignettes/Premium_output/output8_omega.txt
vignettes/Premium_output/output8_predict.txt
vignettes/Premium_output/output8_predictThetaRaoBlackwell.txt
vignettes/Premium_output/output8_psi.txt
vignettes/Premium_output/output8_rho.txt
vignettes/Premium_output/output8_rhoOmegaProp.txt
vignettes/Premium_output/output8_sigmaSqY.txt
vignettes/Premium_output/output8_theta.txt
vignettes/Premium_output/output8_thetaProp.txt
vignettes/Premium_output/output8_z.txt
vignettes/Premium_output/output9_Sigma.txt
vignettes/Premium_output/output9_alpha.txt
vignettes/Premium_output/output9_alphaProp.txt
vignettes/Premium_output/output9_beta.txt
vignettes/Premium_output/output9_betaProp.txt
vignettes/Premium_output/output9_entropy.txt
vignettes/Premium_output/output9_gamma.txt
vignettes/Premium_output/output9_hyper.txt
vignettes/Premium_output/output9_input.txt
vignettes/Premium_output/output9_log.txt
vignettes/Premium_output/output9_logPost.txt
vignettes/Premium_output/output9_mu.txt
vignettes/Premium_output/output9_nClusters.txt
vignettes/Premium_output/output9_nMembers.txt
vignettes/Premium_output/output9_nullMu.txt
vignettes/Premium_output/output9_omega.txt
vignettes/Premium_output/output9_predict.txt
vignettes/Premium_output/output9_predictThetaRaoBlackwell.txt
vignettes/Premium_output/output9_psi.txt
vignettes/Premium_output/output9_rho.txt
vignettes/Premium_output/output9_rhoOmegaProp.txt
vignettes/Premium_output/output9_sigmaSqY.txt
vignettes/Premium_output/output9_theta.txt
vignettes/Premium_output/output9_thetaProp.txt
vignettes/Premium_output/output9_z.txt
vignettes/mmpackTutorial.Rmd
vignettes/mmpackTutorial_cache/.DS_Store
vignettes/mmpackTutorial_cache/html/__packages
vignettes/mmpackTutorial_cache/html/setup_dbd5a8046f23bf5c88cf08dd16e8d4fc.RData
vignettes/mmpackTutorial_cache/html/setup_dbd5a8046f23bf5c88cf08dd16e8d4fc.rdb
vignettes/mmpackTutorial_cache/html/setup_dbd5a8046f23bf5c88cf08dd16e8d4fc.rdx
vignettes/mmpackTutorial_files/figure-html/bkmr_results1-1.png
vignettes/mmpackTutorial_files/figure-html/npb_results2-1.png
vignettes/mmpackTutorial_files/figure-html/npb_results3-1.png
vignettes/mmpackTutorial_files/figure-html/npb_trace1-1.png
vignettes/mmpackTutorial_files/figure-html/npb_trace2-1.png
vignettes/mmpackTutorial_files/figure-html/npb_trace3-1.png
vignettes/mmpackTutorial_files/figure-html/plot_y-1.png
vignettes/mmpackTutorial_files/figure-html/upr_results4-1.png
vignettes/mmpack_vignette.pdf