Man pages for m-swirski/RiboCrypt
Interactive visualization in genomics
| antisense | Get antisense |
| browseRC | Browse a gene on Ribocrypt webpage |
| collection_dir_from_exp | Get collection directory |
| collection_path_from_exp | Get collection directory |
| collection_to_wide | Cast a collection table to wide format |
| compute_collection_table | Get collection table normalized in wide format |
| createSeqPanelPattern | Create sequence panel for RiboCrypt |
| DEG_plot | Differential expression plots (1D or 2D) |
| distanceToFollowing | Distance to following range |
| fetch_JS_seq | Fetch Javascript sequence |
| fetch_summary | Fetch summary of uniprot id |
| geneTrackLayer | How many rows does the gene track need |
| getCoverageProfile | Get coverage profile |
| getIndexes | Get index |
| get_meta_browser_plot_full | Full plot for allsamples browser |
| ggplotlyHover | Call ggplotly with hoveron defined |
| load_collection | Load a ORFik collection table |
| matchMultiplePatterns | Match multiple patterns |
| matchToGRanges | Match to GRanges |
| multiOmicsPlot_animate | Multi-omics animation using list input |
| multiOmicsPlot_list | Multi-omics plot using list input |
| multiOmicsPlot_ORFikExp | Multi-omics plot using ORFik experiment input |
| normalize_collection | Normalize collection table |
| organism_input_select | Select box for organism |
| RiboCrypt_app | Create RiboCrypt app |
| trimOverlaps | Trim overlaps |
