tmp_scripts/settings.R
In magarveylab/clams-release: Mass spec peak picking
mz.file <- "/mnt/storage/mass_spec_samples/data/2017_9/AMK_17-09-15_15613_1006_5_PA-2117.mzml"
minMZ <- 150
maxMZ <- 2000
rtMin <- 50
MZtolerance <- 0.005
RTtolerance <- 30
backgroundIntensity <- 1000
lc <- LCMSunit(mz.file)
lc <- LCMSunitAnalyze(lc, c(minMZ, maxMZ), rtMin , MZtolerance , RTtolerance , backgroundIntensity)
lc <- LCMSunitPDAData(lc)
magarveylab/clams-release documentation built on June 25, 2019, 12:04 a.m.
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mz.file <- "/mnt/storage/mass_spec_samples/data/2017_9/AMK_17-09-15_15613_1006_5_PA-2117.mzml"
minMZ <- 150
maxMZ <- 2000
rtMin <- 50
MZtolerance <- 0.005
RTtolerance <- 30
backgroundIntensity <- 1000
lc <- LCMSunit(mz.file)
lc <- LCMSunitAnalyze(lc, c(minMZ, maxMZ), rtMin , MZtolerance , RTtolerance , backgroundIntensity)
lc <- LCMSunitPDAData(lc)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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