Man pages for magnusnosnes/LineageHomology
Transmission Lineages From Maximum Likelihood Mappings

axisPhyloDateTitle
EXPMTitle
find_midedge_ancestralTitle
FitTransition10xTitle
FitTransitionFreeXTitle
getAncestorsTitle
import_export_local_transmissionimport_export_local_transmission
import_local_transmissionimport_local_transmission
lineage_growth_cumulativeLineage growth cumulative
LineageHomologyLineageHomology
LineageHomology_v2LineageHomology_v2
LineageHomology_w_uncertaintyLineageHomology_w_uncertainty
LineageHomology_w_uncertainty_v2LineageHomology_w_uncertainty_v2
lineage_infolineage_info
makeQTitle
makeQ10XTitle
makeQfreeXTitle
nodeheightTitle
nodeHeightsTitle
nodepath_quicknodepath_quick
nodepath_quick_w_mrcaWritten by Magnus Nygaard Osnes 2021.
nodepath_quick_w_mrca_nodenumbernodepath quick Written by Magnus Nygaard Osnes 2021.
plot_importation_local_transmissionplot_importation_local_transmission
plot_import_export_local_transmissionplot_import_export_local_transmission
reorder_LHreorder_LH
ridgeplot_lineagedensitiesRidgeplot Lineagedensities
Summarize_import_export_local_transmissionSummarize_import_export_local_transmission
Summarize_import_local_transmissionSummarize_import_local_transmission
to.matrixTitle
treemap_lineagehomologytreemap_lineagehomology
treemap_TLstreemap_TLs
magnusnosnes/LineageHomology documentation built on April 17, 2025, 6:30 p.m.