compile_primer: compile_primer

Description Usage Arguments Examples

Description

It generates full sequence of sequencing primers according to your design. It fuses adaptor, barcode and primer sequence of your choice.

Usage

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compile_primer(up_seq, down_seq, barcodes)

Arguments

up_seq

Primer 5' sequence up to the barcode.

down_seq

Primer 3' sequence down to the barcode.

barcodes

Dataframe of filtered barcodes.

Examples

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print("Compiling barcodes...")
barcodes = generate_barcode()
filtered_barcodes = filter_barcode(barcodes)
compiled_primer = compile_primer("AAA", "CCC", filtered_barcodes[,1])
print("done.")

magrichard/h4decoder95 documentation built on May 17, 2019, 8:16 a.m.