mailund/admixture_graph: Admixture Graph Manipulation and Fitting
Version 1.0.2

Implements tools for building and visualising admixture graphs and for extracting equations from them. These equations can be compared to f- statistics obtained from data to test the consistency of a graph against data -- for example by comparing the sign of f_4-statistics with the signs predicted by the graph -- and graph parameters (edge lengths and admixture proportions) can be fitted to observed statistics.

Getting started

Package details

AuthorThomas Mailund [cre, aut], Kalle Leppala [aut], Svend Nielsen [aut]
Date of publication2016-12-13 15:33:28
MaintainerThomas Mailund <[email protected]>
LicenseGPL-2
Version1.0.2
URL https://github.com/mailund/admixture_graph
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("devtools")
library(devtools)
install_github("mailund/admixture_graph")
mailund/admixture_graph documentation built on May 21, 2017, 5:41 p.m.