Man pages for mailund/coalhmm-analysis
Code for analysing the results of CoalHMM runs
| bayes_factor | Compute the Bayes factor between two models. |
| coalhmm_chain | Creates an object for manipulating CoalHMM MCMC chains |
| convergence_diagnostics | Computes convergence diagnostics |
| convergence_probabilities | Computes the probability of convergence at each windows |
| convergence_t_tests | Computes convergence diagnistics |
| equal_distribution | Compares the distributions for each parameter for two chains... |
| mergeable_chains | Tests if a list of chains can be merged |
| model_likelihood | Computes the model log likelihood from MCMC posterior samples |
| parameter_samples | Extract the parameters from the samples data frame |
| rejected_convergence | Determines if the diagnistics means that we reject... |
| strip_burnin | Remove the estimated burn-in samples |
